12.2.2.1. Distance calculation library — MDAnalysis.lib.c_distances¶
Serial versions of all distance calculations
12.2.2.1. Distance calculation library —
Navigation
- 1. Overview over MDAnalysis
- 2. The topology system
- 3. Selection commands
- 4. Analysis modules
- 5. Topology modules
- 6. Coordinates modules
- 7. Trajectory transformations (“on-the-fly” transformations)
- 8. Selection exporters
- 9. Auxiliary modules
- 10. Core modules
- 11. Visualization modules
- 12. Library functions —
MDAnalysis.lib- 12.1. Overview
- 12.2. List of modules
- 12.2.1. Fast distance array computation —
MDAnalysis.lib.distances - 12.2.2. Low-level modules for
MDAnalysis.lib.distances - 12.2.3. Neighbor Search wrapper for MDAnalysis —
MDAnalysis.lib.NeighborSearch - 12.2.4. Neighbor search library —
MDAnalysis.lib.nsgrid - 12.2.5. PeriodicKDTree —
MDAnalysis.lib.pkdtree - 12.2.6. Setting up logging —
MDAnalysis.lib.log - 12.2.7. Mathematical helper functions —
MDAnalysis.lib.mdamath - 12.2.8. Homogeneous Transformation Matrices and Quaternions —
MDAnalysis.lib.transformations - 12.2.9. Fast QCP RMSD structure alignment —
MDAnalysis.lib.qcprot - 12.2.10. Helper functions —
MDAnalysis.lib.util
- 12.2.1. Fast distance array computation —
- 12.3. Low level file formats
- 13. Version information for MDAnalysis -
MDAnalysis.version - 14. Constants and unit conversion —
MDAnalysis.units - 15. Custom exceptions and warnings —
MDAnalysis.exceptions - 16. References
